CDS

Accession Number TCMCG073C23744
gbkey CDS
Protein Id XP_010549093.1
Location join(1038323..1038562,1039172..1039350,1039457..1039540,1040071..1040140,1040249..1040382,1040491..1040554)
Gene LOC104820370
GeneID 104820370
Organism Tarenaya hassleriana

Protein

Length 256aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_010550791.2
Definition PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category A
Description pre-mRNA-splicing factor SPF27 homolog
KEGG_TC -
KEGG_Module M00353        [VIEW IN KEGG]
M00355        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K12861        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000974        [VIEW IN EMBL-EBI]
GO:0002218        [VIEW IN EMBL-EBI]
GO:0002253        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009617        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009870        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010204        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0042742        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045089        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071011        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAACGCACAACGGCGACATCCTGATGCTGGAGGCGGCGCCTGAGGCCACGCGCCCTTGGGCGAGCGCGTCGAATGCGGAGGTCATCGACGCGCTTCCTTACATCGATGACGACTACGGCAATCCTTTCGTGAAGGCGGAGGTCGACCGCTTGGTGGAGGAGGAGATGCGTCGCAGTTCTAAGAAACCCGCTGATTTCCTCAAGGAATTGCCTCCTCTCCCCAAGTTAGATTTCGAGAACTGCCCTATCCTTAGCAAAGAGTATGAGCGTGTCCGAGCGGGGAAACCACCTGTTAGAATCGACTTTGAATCACGGTACAAGTTCGAACTGCCACCTGCTAATAAGAGAAACGATGATGCCGCCTTGAAACAGTCTCTTCAGAGGAATCAACGTTCATTGCAGCAGAAGATGATCGAACTTGAAAATTTGGAGTTGATGTCAAAATATGGTCCTGAGCTTTGGAGACACAACAACCAGCGTTTAGAAGTGTTCTTGTCCAGAATGCAGAGACTTGCTCGAGAGCAGAACGAGAAAATTGAAGCTGTAAACCGTGAAAGAAAATACCATCAGCAAACAACGGCCTATGAGCTCCATGCTCTGTCAGCGGAGTGGAGAGAGCTCTGTGTGAAGAATATGGAGATCCAAACCGCTTGTGCGATGCTCGAGAGTCAGGTTGATGATCTCAAAAGGGAAGCCGCTGAAAGGGGATGGAATTTGGAAGAGAAATTAGAGAATGGGGCCGCTGTTGCATTAAGAGAGAGCAGTTAG
Protein:  
MATHNGDILMLEAAPEATRPWASASNAEVIDALPYIDDDYGNPFVKAEVDRLVEEEMRRSSKKPADFLKELPPLPKLDFENCPILSKEYERVRAGKPPVRIDFESRYKFELPPANKRNDDAALKQSLQRNQRSLQQKMIELENLELMSKYGPELWRHNNQRLEVFLSRMQRLAREQNEKIEAVNRERKYHQQTTAYELHALSAEWRELCVKNMEIQTACAMLESQVDDLKREAAERGWNLEEKLENGAAVALRESS